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NucleoSpin Gel and PCR Clean-up, Mini kit for gel extraction or PCR clean up

NucleoSpin Gel and PCR Clean-up is a spin column based kit providing a 2-in-1 solution for the purification of nucleic acids from both PCR mixtures and gels. The kit has been designed with various contaminants and variable sample volumes in mind, ensuring optimal recovery and purity of each individual sample.

Application PCR clean up and gel extraction
Automated use No
Brand NucleoSpin
CE certified No, research use only
Elution volume 15−30 µL
Format Mini prep
Fragment size < 25 kbp
Handling Centrifugation, vacuum
Hazardous material Yes
Preparation time 10 min/6 preps
Sample amount < 200 µL PCR reaction mixture, < 200 mg agarose gel
Sample material Agarose gel, PCR reaction mixture
Selling unit 10 Prep(s), 50 Prep(s), 250 Prep(s)
Shelf life (from production) 27 Month(s)
Storage temperature 15–25 °C / 59–77 °F
Target Clean up
Technology Silica membrane technology
Theoretical binding capacity 25 µg
Typical downstream application Cloning, PCR, Restriction analysis, Sequencing
Typical purity A260/A280 1.8−1.9
Typical recovery 70−95 %

2-in-1 PCR clean up and gel extraction (Mini and XS)

Whether for restriction digest, ligation and transformation, PCR or sequencing - all those applications need clean, good quality DNA as input. Although PCR clean-up and gel extraction is one of the most common applications in the laboratory, it is often the supposedly simple applications like PCR clean-up and gel extraction that can pose challenge and determine the success of a research project.

Watch our NucleoSpin Gel and PCR Clean-up (XS) workflow video to see how to get most out of your PCR and gel extraction procedure:

The following tips might help you to maximize your yield and DNA quality:

Minimize the amount of UV exposure

Prolonged exposure can damage your DNA. So try to cut out your bands as fast as possible. 

Make sure to actually weigh the gel slice

The weight of a gel slice is easily underestimated. Up to 200 mg of agarose gel can be dissolved with 400 µl Buffer NTI and loaded onto the NucleoSpin Gel and PCR columns. Make also sure to melt your agarose completely before you apply the sample to the column. Excess, unmelted agarose can interfere with the extraction procedure.

Optimize the elution for maximum yield

Reapply the eluate a second time to the NucleoSpin Gel and PCR Clean-up column. This will help to increase the recovery while keeping the volume of the elution buffer low. Multiple rounds of elution can increase the recovery significantly. Heating the elution buffer to 70 °C and incubate elution buffer on the column at 70 °C for 5 minutes will help to increase the recovery as well. If you are planning to elute in a very small volume make sure to use our NucleoSpin Gel and PCR Clean-up XS columns optimized for elution volumes below 10 µl. The newly developed column is the best tool for rapid sample concentration.

Ph matters - use elution buffer and not water for elution

Use a slightly alkaline elution buffer, like elution buffer NE for optimal performance. Water is typically acidic and elution will work more efficiently in a slightly alkaline environment.

Don't skip the drying step

The drying step is really important to ensure efficient removal of residual ethanol. Ethanol is a well known PCR inhibitor and can cause issues in many downstream applications.

Continue reading

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