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IsoPure Mini scripts

Application overview and script download for MACHEREY‑NAGEL’s magnetic bead-based NucleoMag DNA/RNA extraction solutions on the IsoPure Mini instrument.

The MACHEREY-NAGEL automation specialists have developed verified skripts for the NucleoMag DNA / RNA extraction solutions on the IsoPure Mini instrument.

All protocols are accessible free of charge and can easily be transferred to your IsoPure Mini via the handled scanner that is included with each IsoPure Mini. Simply scan the QR codes to the corresponding kit for instant transfer.

For each protocol, you will also receive further information on the process processing, loading schemes and additional consumables. For easy access to the additional protocol information, simply click on the corresponding link in the kit information below.

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Do you have questions on MACHEREY‑NAGEL’s reagents for automation, scripting support or automation service?

Please contact our application specialists for more detailed information: 

automation-bio@mn-net.com

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Plasmid

NucleoMag Plasmid
REF 744750.1 / 744750.4
Specifications Magnetic bead-based kit for the purification of plasmid DNA on magnetic rod systems
Sample materials E.coli
Lysate clarification Centrifugation
Endotoxin level ≤ 50 EU/µg DNA
Script name NMPlasmid
Run time Approx. 50 min
Protocol information Protocol information are found in the kit's handbook.
NucleoMag Plasmid
REF 744750.1 / 744750.4
Specifications Magnetic bead-based kit for the purification of plasmid DNA on magnetic rod systems
Sample materials E.coli
Lysate clarification Centrifugation
Endotoxin level ≤ 10 EU/µg DNA
Script name NMPlasmidTG
Run time Approx. 60 min
Protocol information Protocol information are found in the kit's handbook.
NucleoMag Plasmid
REF 744750.1 / 744750.4
Specifications Magnetic bead-based kit for the purification of plasmid DNA on magnetic rod systems
Sample materials E.coli
Lysate clarification NucleoMag Clearing Beads
Endotoxin level ≤ 50 EU/µg DNA
Script name NMPlasmidCB
Run time Approx. 70 min
Protocol information Protocol information are found in the kit's handbook.

Clean Up

NucleoMag NGS Clean up (DNA/RNA)
REF 744970.5 / 744970.50 / 744970.500
Specifications NucleoMag NGS Bead suspension (5 mL, 50 mL, 500 mL) for clean up and size selection of DNA or RNA fragments from a variety of reaction mixtures
Sample materials e.g. DNA used in library construction process for NGS or RNA generated by in vitro transcription
Script name NMNGSclean-up / NMNGSSingleSizeSel
Run time Approx. 30 min
Protocol information Please click here for further protocol information.
NucleoMag NGS Size Select
REF 744970.5 / 744970.50 / 744970.500
Specifications NucleoMag NGS Bead suspension (5 mL, 50 mL, 500 mL) for clean up and size selection of DNA fragments from a variety of reaction mixtures
Sample materials e.g. DNA used in library construction process for NGS or RNA generated by in vitro transcription
Script name NMNGSSingleSizeSel
Run time Approx. 30 min
Protocol information Please click here for further protocol information.

RNA

NucleoMag RNA
REF 744350.1
Specifications Magnetic bead-based kit for the isolation of RNA from cells and tissue; including NucleoMag B-Beads, buffers, rDNase
Sample materials < 2 x 10⁶ cells, < 20 mg human / animal / plant tissue
Script name NMRNA
Run time Approx. 60 min
Protocol information Please click here for further protocol information.
NucleoMag RNA Pro
REF 744360.1 / 744360.4
Specifications Magnetic bead-based kit for the isolation of RNA from cells, tissue and plant leaf material; including NucleoMag B-Beads, buffers, rDNase
Sample materials <  2 x 10⁶ cells, < 20 mg human / animal tissue, < 40 mg plant leaf tissue
Script name NMRNAPro
Run time Approx. 74 min
Protocol information Please click here for further protocol information.
NucleoMag RNA/DNA Pro
REF 744370.1
Specifications Magnetic bead-based kit for the isolation of RNA and DNA from cells, tissue and plant leaf material; including NucleoMag B-Beads, buffers, rDNase
Sample materials <  2 x 10⁶ cells, < 20 mg human / animal tissue, < 40 mg plant leaf tissue
Script name NMRNADNAPro
Run time Approx. 87 min
Protocol information Please click here for further protocol information.
NucleoMag RNA Blood
REF 744352.1 / 744352.4
Specifications Magnetic bead-based kit for the purification of RNA from whole blood samples collected in SARSTEDT S-Monovette® RNA Exact, Zymo DNA/RNA Shield Blood Tubes, or Tempus RNA Blood Tubes. The kit includes NucleoMag B-Beads, Buffers, Liquid Proteinase K, and RNase-free rDNase.
Sample materials Whole blood samples collected in SARSTEDT S-Monovette® RNA Exact, Zymo DNA/RNA Shield Blood Tubes, or Tempus RNA Blood Tubes.
Script name NMRNABloodR02
Run time Approx. 78 min
Protocol information Please click here for further protocol information.

cfDNA

NucleoMag cfDNA
REF 744550.1 / 744550.4
Specifications Magnetic bead-based kit for the isolation of circulating DNA from plasma samples; including NucleoMag P-Beads, buffers, Liquid Proteinase K
Sample materials up to 375 µL human plasma on the IsoPure Mini (EDTA, Cell-Free DNA BCT)
Script name NMcfDNA
Run time Approx. 30 min
Protocol information Please click here for further protocol information.

Genomic DNA

NucleoMag Blood 200 µL
REF 744501.1 / 744501.4
Specifications Magnetic bead-based kit for the isolation of genomic DNA from blood; including NucleoMag B-Beads, buffers, Proteinase K
Sample materials ≤ 200 µL whole blood (fresh or frozen, EDTA or citrate treated)
Script name NMBlood200
Run time Approx. 20 min
Protocol information Please click here for further protocol information.
NucleoMag Blood 200 µL Prefilled Plates
REF 744510
Specifications Ready-to-use prefilled plate already containing the NucleoMag Blood 200 µL buffer chemistry, including the magnetic beads. For the isolation of genomic DNA from whole blood. Lysis buffer, proteinase K and tip combs are also included.
Sample materials ≤ 200 µL whole blood (fresh or frozen, EDTA or citrate treated)
Script name NMBlood200PFP
Run time Approx. 30 min
Protocol information Protocol information are found in the kit's handbook.
NucleoMag HMW DNA
REF 744160.1
Specifications Magnetic bead-based kit for the isolation of high molecular weight DNA from diverse sample types; including NucleoMag B-Beads, buffers, Liquid Proteinase K, RNase A (lyophilized)
Sample materials Cells, human and animal tissue, plant, whole blood, bacteria, yeast, saliva, swabs
Script name NMHMWRev1
Run time Approx. < 60 min
Protocol information Please click here for further protocol information.
NucleoMag Tissue
REF 744300.1 / 744300.4
Specifications Magnetic bead-based kit for the isolation of DNA from tissues, cells, and bacterial pellets; including NucleoMag B-Beads, buffers ,and Proteinase K
Sample materials < 20 mg tissue; <  10^6 cells; bacterial pellets
Script name NMTissue
Run time Approx. 20 min
Protocol information Please click here for further protocol information.
NucleoMag Tissue Prefilled Plates
REF 744302
Specifications Ready-to-use prefilled plate already containing the NucleoMag Tissue buffer chemistry, including the magnetic beads. For the isolation of genomic DNA from tissues, cells, and bacterial pellets. Lysis buffer, proteinase K and tip combs are also included.
Sample materials <  20 mg tissue; < 10^6 cells; bacterial pellets
Script name NMTissuePFP
Run time Approx. 30 min
Protocol information Protocol information are found in the kit's handbook.
NucleoMag DNA Swab
REF 744601.1 / 744601.4 / 744601.24
Specifications Magnetic bead-based kit for isolation of DNA from swabs; including NucleoMag B-Beads, buffers, Proteinase K
Sample materials Swab specimens for DNA isoloation (host or microbial)
Script name NMDNASwab
Run time Approx. 30 min
Protocol information Please click here for further protocol information.
NucleoMag DNA FFPE
REF 744320.1 / 744320.4
Specifications Magnetic bead-based kit for the isolation of genomic DNA from formalin-fixed paraffin-embedded samples; including NucleoMag B-Beads, buffers, Proteinase K, paraffin dissolver, decrosslink buffer
Sample materials FFPE, fixed samples, tissue sections (≤ 5 mg tissue, <  15 mg paraffin)
Script name NMDNAFFPE
Run time Approx. 20 min
Protocol information Please click here for further protocol information.
NucleoMag DNA Forensic
REF 744660.1 / 744660.4
Specifications Magnetic bead-based kit for the isolation of genomic DNA from forensic traces; including NucleoMag F-Beads, buffers, Proteinase K (Conformity with ISO 18385)
Sample materials Forensic traces such as blood spots, casework samples, cigarette filters, contract traces, swabs
Script name NMForensic
Run time Approx. 40 min
Protocol information Please click here for further protocol information.
NucleoMag Plant
REF 744400.1 / 744400.4 / 744400.24
Specifications Magnetic bead-based kit for the isolation of genomic DNA from plant samples; including NucleoMag C-Beads, buffers, RNase A, Elution Plate U-bottom
Sample materials 20 – 50 mg plant tissue (wet weight)
Script name NMPlant
Run time Approx. 20 min
Protocol information Please click here for further protocol information.
NucleoMag DNA/RNA Water
REF 744220.1 / 744220.4
Specifications Magnetic bead-based kit for the isolation of DNA and / ​or RNA from water and air samples; including NucleoMag B-Beads, buffers
Sample materials Filtered air and water samples (10 – 1000 mL)
Script name NMWater
Run time Approx. 40 min
Protocol information Please click here for further protocol information.
NucleoMag DNA Bacteria
REF 744310.1 / 744310.4
Specifications Magnetic bead based kit for the purification of genomic DNA from bacteria or yeast; including NucleoMag B-Beads, Elution Plate U-bottom, buffers, Liquid Proteinase K, Liquid RNase A
Sample materials <  40 mg insects <  40 mg (10⁸–10⁹) bacteria <  30 mg fungi <  30 mg lipid rich tissue <  40 mg other tissues
Script name NMBacteria
Run time Approx. 40 min
Protocol information Please click here for further protocol information.
NucleoMag DNA Microbiome
REF 744330.1 / 744330.4
Specifications Magnetic bead-based kit for the purification of microbial DNA from soil, biofilm and fecal samples contains NucleoMag B-Beads, buffers
Sample materials 50 – 200 mg Biofilm samples (incl. swabs), Soil, Stool
Script name NMMicrobiome
Run time Approx. 40 min
Protocol information Please click here for further protocol information.
NucleoMag DNA Food
REF 744945.1 / 744945.4
Specifications Magnetic bead-based kit for the isolation of genomic DNA from food and feed samples; including NucleoMag B-Beads, buffers, Liquid Proteinase K
Sample materials < 200 mg food and feed samples, fluid samples like milk or juice
Script name NMFood
Run time Approx. 40 min
Protocol information Please click here for further protocol information.

Viral DNA/RNA

NucleoMag Virus
REF 744800.1 / 744800.4
Specifications Magnetic bead-based kit for the isolation of viral RNA / ​DNA from cell-free biological fluids; including NucleoMag V-Beads, buffers, Carrier RNA and Proteinase K
Sample materials <  200 µL cell-free biological fluid, plasma, serum
Script name NMVirus
Run time Approx. 20 min
Protocol information Please click here for further protocol information.
NucleoMag Pathogen / NucleoMag Pathogen Prefilled Plates
REF 744210.1 / 744210.4 / 744210.100 / 744211
Specifications Magnetic bead-based kit for the isolation of viral RNA / ​DNA, and microbial DNA from human clinical samples; including NucleoMag B-Beads, buffers, Carrier RNA and Proteinase K
Sample materials ≤ 200 µL whole blood, serum, plasma, ≤ 200 µL swab wash solution ≤ 25 mg tissue ≤ 200 µL feces
Script name NMPathogen
Run time Approx. 30 min
Protocol information Please click here for further protocol information.
NucleoMag VET / NucleoMag VET Prefilled Plates
REF 744200.1 / 744200.4 / 744200.100 / 744209
Specifications Magnetic bead-based kit for the isolation of viral RNA / ​DNA, and microbial DNA from veterinary samples; including NucleoMag B-Beads, buffers, Carrier RNA and Proteinase K
Sample materials ≤ 200 µL whole blood, serum, plasma ≤ 200 µL swab wash solution ≤ 25 mg tissue (e.g. ear notches) ≤ 200 µL feces
Script name NMVET
Run time Approx. 30 min
Protocol information Please click here for further protocol information.